CDS

Accession Number TCMCG006C88642
gbkey CDS
Protein Id XP_013682852.1
Location join(16933643..16934219,16934359..16934474,16934583..16934702,16934783..16934968,16935074..16935289,16935385..16935602,16935701..16935776,16935857..16935946,16936031..16937224)
Gene LOC106387528
GeneID 106387528
Organism Brassica napus

Protein

Length 930aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013827398.2
Definition chaperone protein ClpC1, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category O
Description Belongs to the ClpA ClpB family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
KEGG_ko ko:K03696        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01100        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004176        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009528        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009706        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010380        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031897        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031969        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042170        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045036        [VIEW IN EMBL-EBI]
GO:0045037        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051193        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072596        [VIEW IN EMBL-EBI]
GO:0072598        [VIEW IN EMBL-EBI]
GO:0090056        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901401        [VIEW IN EMBL-EBI]
GO:1901463        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTATGGCCACAAGGGTGATGTCTCAATCTACTCCACTGTCTCTGGCATGTTCCCAGAGGAACGCTCCCTCTCGTGGATCTGGCAACTCAAAAAGATCGGTGAAAATGATGTGCACTCAGCTACGAGTCTCTGGTTCCTCAAGAATGCAAGGGTTCTTGGGGTTGCGTGGGAACAATGCCTTAGACACTCTAGGGAGATCCCGTCAGAGTTTCGGTGGTAAAGTGCGGCATGCGATGAATGTACCCAAGGGGAAAGGTAGCCGGGGTGTGGTCAAAGCGATGTTTGAGAGGTTTACTGAGAAGGCTATCAAGGTTATTATGCTTGCTCAGGAGGAAGCTAGGAGACTAGGCCACAATTTTGTGGGGACCGAACAGATTCTTCTAGGGCTTATTGGTGAGGGTACTGGAATCGCTGCTAAGGTTTTGAAGTCCATGGGGATTAACCTTAAGGATGCACGTGTGGAGGTTGAGAAGATTATTGGAAGGGGCAGTGGGTTTGTTGCTGTTGAGATCCCGTTTACTCCTCGTGCAAAGCGTGTTCTTGAACTCTCACTGGAAGAAGCTCGCCAACTCGGTCACAATTACATCGGTTCCGAGCACCTTCTTCTTGGGTTGCTACGTGAAGGTGAAGGTGTTGCTGCTCGAGTCCTTGAGAATCTAGGTGCAGATCCTAGTAACATTCGCACTCAGGTGATACGCATGGTGGGTGAGAACAATGAGGTCACTGCTAATGTTGGAGGAGGAAGCGGCAGCAATAAGATGCCAACTCTTGAAGAGTACGGGACAAACTTGACGAAGCTGGCTGAGGAGGGTAAATTGGACCCGGTTGTTGGTAGGCAGCCACAAATAGAACGTGTCGTGCAAATTCTTGGTAGGAGAACCAAGAACAACCCATGTCTTATTGGAGAACCTGGTGTTGGTAAGACAGCTATTGCCGAAGGACTAGCGCAGCGTATTGCCAGTGGAGATGTTCCTGAAACAATTGAAGGGAAGAAGGTTATAACACTTGACATGGGTCTTCTGGTTGCTGGAACAAAATATCGTGGAGAGTTTGAAGAGAGATTGAAAAAGCTTATGGAGGAAATTAAACAGAGTGACGAGATCATCTTGTTTATCGATGAAGTGCATACTTTGATTGGAGCAGGAGCAGCAGAAGGTGCAATTGACGCAGCTAACATTTTAAAACCCGCTCTCGCTAGAGGTGAATTGCAGTGCATTGGAGCGACAACATTAGACGAATACAGGAAGCACATTGAGAAAGACCCTGCATTGGAAAGAAGATTCCAGCCAGTGAAAGTACCTGAGCCTACTGTGGATGAAACTATTCAGATCCTAAAGGGTCTGCGAGAGCGATATGAAATTCATCATAAGCTTCGTTACACTGACGAGTCTTTAGTAGCAGCTGCACAGTTGTCATACCAGTATATCAGTGATCGTTTCCTACCTGACAAGGCAATTGACTTGATCGATGAAGCTGGTTCTCGGGTTCGACTTCGCCATGCACAGGTCCCTGAGGAAGCTAGGGAGCTTGAGAAGGAACTTAGGCAGATAACAAAGGAGAAGAATGAAGCTGTCCGTGGCCAGGACTTTGAGAAGGCTGGGACACTTCGGGATAGAGAAATTGAGCTCAGAGCTGAGGTGTCTGCTATCCAAGCGAAAGGCAAGGAGATGAGCAAAGCAGAGAGTGAGACTGGTGAGGAAGGTCCTATGGTGACAGAGTCAGACATCCAACACATTGTGTCTTCATGGACTGGTATCCCCGTAGAGAAGGTATCAACCGATGAGTCTGATCGTCTCCTCAAGATGGAAGAAACCCTCCACAAACGTGTCGTAGGCCAAGACGAAGCTGTCAAAGCCATAAGCCGAGCCATTCGCCGTGCACGTGTTGGACTCAAAAACCCTAACCGTCCAATAGCCAGTTTCATATTCTCTGGTCCTACTGGTGTCGGGAAATCAGAGCTTGCCAAAGCTTTGGCAGCTTACTACTTTGGATCTGAAGAAGCCATGATTCGTCTAGATATGAGTGAGTTCATGGAGAGGCACACAGTCTCGAAACTCATAGGTTCGCCTCCTGGATACGTCGGTTACACTGAAGGAGGTCAGCTAACGGAAGCAGTTAGACGTCGCCCTTACACAGTCGTTCTGTTCGACGAGATAGAGAAAGCCCACCCAGATGTTTTCAACATGATGCTTCAGATCCTCGAAGATGGTAGACTAACAGACAGCAAAGGAAGAACAGTGGACTTCAAAAACACGCTTCTCATCATGACATCAAACGTCGGCAGCAGTGTGATCGAGAAAGGAGGAAGACGTATTGGTTTCGACTTGGACTACGACGAGAAAGACAGCAGCTACAACAGAATCAAGAGCCTTGTGACCGAGGAGCTGAAACAGTACTTCAGACCGGAGTTCCTAAACAGGCTTGACGAGATGATTGTGTTCAGACAGCTAACGAAGCTGGAAGTGAAAGAAATTGCGGACATACTGCTACAGGAGGTGTTTGAGAGGCTGAAGAAGAAGGAGATTGAGCTTCAAGTGACAGAGAGGTTCAGAGAGAGAGTAGTGGACGAAGGTTATAACCCGAGCTATGGAGCGAGACCATTGAGGAGAGCCATCATGAGACTTTTAGAGGATAGCATGGCGGAAAAGATGCTAGCGAGAGAGATCAAGGAAGGAGACTCGGTGATTGTGGACGTTGACTCGGAAGGTAAAGTGACTGTGCTAAATGGTGGAAGTGGCACTCCCACAACATCCTTGGAGGAGCAGGAAGATTCTCTCCCCGTTGCTTGA
Protein:  
MAMATRVMSQSTPLSLACSQRNAPSRGSGNSKRSVKMMCTQLRVSGSSRMQGFLGLRGNNALDTLGRSRQSFGGKVRHAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTANVGGGSGSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLQEVFERLKKKEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPVA